From: Ranking relations between diseases, drugs and genes for a curation task
PharmGKB data set | |||||||||
---|---|---|---|---|---|---|---|---|---|
 |  | t | tm | tc | tmc | ||||
Entity | N | abs | rel | abs | rel | abs | rel | abs | rel |
Di | 3830 | 2550 | 66.58 | 2872 | 74.99 | 2557 | 66.76 | 2872 | 74.99 |
Dr | 4751 | 3527 | 74.24 | 3632 | 76.45 | 3668 | 77.20 | 3668 | 77.20 |
Ge | 7522 | 5838 | 77.61 | 5930 | 78.84 | 5989 | 79.62 | 5994 | 79.69 |
TOTAL | 16103 | 11915 | 73.99 | 12434 | 77.22 | 12214 | 75.85 | 12534 | 77.84 |
Di-Di | 68 | 22 | 32.35 | 24 | 35.29 | 22 | 32.35 | 24 | 35.29 |
Di-Dr | 2715 | 1279 | 47.11 | 1484 | 54.66 | 1326 | 48.84 | 1494 | 55.03 |
Di-Ge | 5432 | 3102 | 57.11 | 3555 | 65.45 | 3181 | 58.56 | 3585 | 66.00 |
Dr-Dr | 181 | 128 | 70.72 | 132 | 72.93 | 135 | 74.59 | 135 | 74.59 |
Dr-Ge | 6181 | 3858 | 62.42 | 4016 | 64.97 | 4097 | 66.28 | 4099 | 66.32 |
Ge-Ge | 248 | 141 | 56.85 | 142 | 57.26 | 145 | 58.47 | 145 | 58.47 |
TOTAL | 14825 | 8530 | 57.54 | 9353 | 63.09 | 8906 | 60.07 | 9482 | 63.96 |
CTD data set | |||||||||
 |  | t | tm | tc | tmc | ||||
Entity | N | abs | rel | abs | rel | abs | rel | abs | rel |
Di | 12639 | 6939 | 54.90 | 9502 | 75.18 | 6941 | 54.92 | 9502 | 75.18 |
Dr | 38523 | 27541 | 71.49 | 29531 | 76.66 | 30119 | 78.18 | 30129 | 78.21 |
Ge | 39150 | 28389 | 72.51 | 28975 | 74.01 | 29169 | 74.51 | 29199 | 74.58 |
TOTAL | 90312 | 62869 | 69.61 | 68008 | 75.30 | 66229 | 73.33 | 68830 | 76.21 |
Di-Ge | 6956 | 4117 | 59.19 | 5100 | 73.32 | 4163 | 59.85 | 5126 | 73.69 |
Dr-Di | 12154 | 5335 | 43.90 | 8219 | 67.62 | 5700 | 46.90 | 8356 | 68.75 |
Dr-Ge | 52746 | 31015 | 58.80 | 33971 | 64.40 | 34832 | 66.04 | 34883 | 66.13 |
TOTAL | 71856 | 40467 | 56.32 | 47290 | 65.81 | 44695 | 62.20 | 48365 | 67.31 |