From: Matching disease and phenotype ontologies in the ontology alignment evaluation initiative
System-mappings | Mappings | Precision-2 | F-Measure-2 | Recall-2 | Precision-3 | F-Measure-3 | Recall-3 |
---|---|---|---|---|---|---|---|
BioPortal (baseline) | 639 | 1.00 | 0.50 | 0.33 | 1.00 | 0.60 | 0.43 |
AML | 1755 | 0.93 | 0.86 | 0.80 | 0.85 | 0.90 | 0.94 |
DiSMatch | 644 | 0.55 | 0.30 | 0.21 | 0.45 | 0.28 | 0.20 |
FCA − Map | 1590 | 0.98 | 0.85 | 0.75 | 0.94 | 0.93 | 0.92 |
LYAM + + | 381 | 0.41 | 0.12 | 0.07 | 0.17 | 0.06 | 0.04 |
LogMap | 2011 | 0.94 | 0.92 | 0.91 | 0.77 | 0.86 | 0.97 |
LogMapBio | 2151 | 0.92 | 0.92 | 0.93 | 0.75 | 0.85 | 0.98 |
LogMapLt | 667 | 1.00 | 0.51 | 0.34 | 1.00 | 0.62 | 0.45 |
PhenoMF | 204,089 | 0.76 | 0.83 | 0.92 | 0.63 | 0.76 | 0.95 |
PhenoMM | 198,149 | 0.77 | 0.83 | 0.91 | 0.64 | 0.76 | 0.94 |
PhenoMP | 169,660 | 0.78 | 0.67 | 0.58 | 0.64 | 0.57 | 0.51 |
XMap | 650 | 1.00 | 0.50 | 0.33 | 1.00 | 0.61 | 0.44 |