From: Multi-domain knowledge graph embeddings for gene-disease association prediction
RDF2Vec | OPA2Vec | OWL2Vec* | DistMult | ||
---|---|---|---|---|---|
CS | HPd-f+GO | 0.484 | 0.532 | 0.493 | 0.499 |
HPd-s+GO+LD | 0.503 | 0.525 | 0.502 | 0.497 | |
HPd-s+GO+Map | 0.463 | 0.526 | 0.495 | 0.500 | |
HPd-s+GO+LD+Map | 0.506 | 0.525 | 0.502 | 0.502 | |
RF | HPd-f+GO | 0.664 | 0.689 | 0.597 | 0.551 |
HPd-s+GO+LD | 0.657 | 0.703 | 0.604 | 0.576 | |
HPd-s+GO+Map | 0.659 | 0.700 | 0.617 | 0.568 | |
HPd-s+GO+LD+Map | 0.663 | 0.702 | 0.617 | 0.576 | |
XGB | HPd-f+GO | 0.635 | 0.672 | 0.571 | 0.547 |
HPd-s+GO+LD | 0.634 | 0.683 | 0.587 | 0.565 | |
HPd-s+GO+Map | 0.632 | 0.679 | 0.588 | 0.570 | |
HPd-s+GO+LD+Map | 0.631 | 0.684 | 0.595 | 0.569 |