Volume 2 Supplement 1

Semantic Web Applications and Tools for Life Sciences (SWAT4LS), 2009

Research

Edited by Andrea Splendiani, Albert Burger, Adrian Paschke, Paolo Romano and M Scott Marshall

Semantic Web Applications and Tools for Life Sciences (SWAT4LS), 2009. Go to conference site.

Amsterdam, The Netherlands

20 November 2009

  1. Research

    Biomedical semantics in the Semantic Web

    The Semantic Web offers an ideal platform for representing and linking biomedical information, which is a prerequisite for the development and application of analytical tools to address problems in data-intens...

    Andrea Splendiani, Albert Burger, Adrian Paschke, Paolo Romano and M Scott Marshall

    Journal of Biomedical Semantics 2011 2(Suppl 1):S1

    Published on: 7 March 2011

  2. Research

    Logic-based assessment of the compatibility of UMLS ontology sources

    The UMLS Metathesaurus (UMLS-Meta) is currently the most comprehensive effort for integrating independently-developed medical thesauri and ontologies. UMLS-Meta is being used in many applications, including PubMe...

    Ernesto Jiménez-Ruiz, Bernardo Cuenca Grau, Ian Horrocks and Rafael Berlanga

    Journal of Biomedical Semantics 2011 2(Suppl 1):S2

    Published on: 7 March 2011

  3. Research

    Mapping between the OBO and OWL ontology languages

    Ontologies are commonly used in biomedicine to organize concepts to describe domains such as anatomies, environments, experiment, taxonomies etc. NCBO BioPortal currently hosts about 180 different biomedical o...

    Syed Hamid Tirmizi, Stuart Aitken, Dilvan A Moreira, Chris Mungall, Juan Sequeda, Nigam H Shah and Daniel P Miranker

    Journal of Biomedical Semantics 2011 2(Suppl 1):S3

    Published on: 7 March 2011

  4. Research

    Mining semantic networks of bioinformatics e-resources from the literature

    There have been a number of recent efforts (e.g. BioCatalogue, BioMoby) to systematically catalogue bioinformatics tools, services and datasets. These efforts rely on manual curation, making it difficult to co...

    Hammad Afzal, James Eales, Robert Stevens and Goran Nenadic

    Journal of Biomedical Semantics 2011 2(Suppl 1):S4

    Published on: 7 March 2011

  5. Research

    Semantics-based composition of EMBOSS services

    More than in other domains the heterogeneous services world in bioinformatics demands for a methodology to classify and relate resources in a both human and machine accessible manner. The Semantic Web, which i...

    Anna-Lena Lamprecht, Stefan Naujokat, Tiziana Margaria and Bernhard Steffen

    Journal of Biomedical Semantics 2011 2(Suppl 1):S5

    Published on: 7 March 2011

  6. Research

    Linking the Resource Description Framework to cheminformatics and proteochemometrics

    Semantic web technologies are finding their way into the life sciences. Ontologies and semantic markup have already been used for more than a decade in molecular sciences, but have not found widespread use yet...

    Egon L Willighagen, Jonathan Alvarsson, Annsofie Andersson, Martin Eklund, Samuel Lampa, Maris Lapins, Ola Spjuth and Jarl ES Wikberg

    Journal of Biomedical Semantics 2011 2(Suppl 1):S6

    Published on: 7 March 2011

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