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Table 1 Results of the pMKL single kernel experiments

From: Protein interaction sentence detection using multiple semantic kernels

Kernel

F-score

Error

Precision

Recall

AUC

C0: Xa

0.7300 ± 0.0058

17.6878 ± 0.3158

0.6893 ± 0.0072

0.7828 ± 0.0079

0.8902 ± 0.0033

XH b

0.7060 ± 0.0060

18.3453 ± 0.3203

0.6989 ± 0.0074

0.7210 ± 0.0084

0.8899 ± 0.0031

XB b

0.6567 ± 0.0080

20.6249 ± 0.4113

0.6759 ± 0.0086

0.6501 ± 0.0113

0.8776 ± 0.0035

XH c

0.6921 ± 0.0056

18.5716 ± 0.3200

0.7113 ± 0.0072

0.6808 ± 0.0077

0.8888 ± 0.0029

XB c

0.7267 ± 0.0052

17.2958 ± 0.3087

0.7117 ± 0.0070

0.7490 ± 0.0071

0.9000* ± 0.0028

  1. a The original data with the Gaussian kernel.
  2. b The data smoothed with the HAL and BEAGLE (Gaussian) matrices created from GENIA dataset.
  3. c The data smoothed with the HAL and BEAGLE (Gaussian) matrices created from the OAA dataset.
  4. * Statistically significant (p = 0.0038) compared to kernel C0.