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Table 2 Results of the pMKL multiple kernel experiments with fixed weights

From: Protein interaction sentence detection using multiple semantic kernels

Kernel F-score Error Precision Recall AUC
C 1 0.7039 ± 0.0054 17.5614 ± 0.3378 0.7381 ± 0.0059 0.6790 ± 0.0080 0.8881 ± 0.0029
C 2 0.7052 ± 0.0054 18.3698 ± 0.3337 0.7012 ± 0.0063 0.7155 ± 0.0076 0.8838 ± 0.0031
C 3 0.7359 ± 0.0045 16.8581 ± 0.2934 0.7156 ± 0.0063 0.7631 ± 0.0063 0.9092* ± 0.0023
C 4 0.6633 ± 0.0080 19.0861 ± 0.3507 0.7301 ± 0.0078 0.6242 ± 0.0119 0.8883 ± 0.0029
  1. C1: Uniform sum of Gaussian kernels from HAL matrices with window lengths l 1 through 10 (OAA).
  2. C2: Uniform sum of Gaussian kernels from HAL matrices with window lengths L 1 through 10 (OAA).
  3. C3: Uniform sum of 6 Gaussian, cosine, and polynomial kernels using HAL Hl = 1from both OAA and GENIA.
  4. C4: Estimated sum of Gaussian kernels from HAL matrices with window lengths l 1 through 10 (OAA).
  5. *Statistically significant (p = 0.0016) compared to kernel C0.