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Table 1 Performance of spgk.

From: A shortest-path graph kernel for estimating gene product semantic similarity

Ontology

BP

MF

CC

Pearson's Correlation Coefficient

0.855

0.852

0.703

  1. The performance is measured by the Pearson's correlation coefficients between the semantic similarity given by spgk and the functional similarity estimated from Pfam annotations. BP, MF, CC are the three ontologies in the GO.
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Journal of Biomedical Semantics

ISSN: 2041-1480