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Description
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Service to query, browse and navigate biomedical ontologies
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Collaborative platform having shared principles to govern and coordinate ontology development
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System to access and share ontologies that are actively used in biomedical communities
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Infrastructure to manage, analyze and match ontologies taking their evolution into account
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System for aligning and merging biomedical ontologies
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Supported ontology formats
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OBO
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OBO, OWL
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OBO, OWL, RDF, RRF, ...
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OBO, OWL, RDF, ... (extensible via flexible importers)
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OWL
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Ontology mappings
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-
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x
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x
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x
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x
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Versioning support
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- (only latest versions are accessible)
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x (downloadable versions via CVS repository)
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x (access and download of ontology versions)
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x (efficient versioning of ontologies in a repository)
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- (no explicit ontology versioning possible)
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Evolution mappings
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1) change log
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-
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x (information about changes via newsletters)
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-
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- (version comparison to detect changes)
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-
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2) complex diff
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-
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-
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-
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x
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-
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Match support/functionality
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-
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-
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-
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x (metadata, external knowledge, instances)
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x (metadata, external knowledge, documents, learner)
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Search, navigation
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ontologies
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ontologies
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ontologies and mappings
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ontologies, ontology evolution
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-
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"Special Functionalities"
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auto completion, term hierarchies via graphs
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discussion lists and wiki to support collaborative development
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automatic text annotation
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enhanced Diff, annotation migration
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merging, user interaction
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Availability and Access
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1) download (ontologies, mappings)
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x
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x
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x
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-
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-
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2) visualization/GUI
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x (web application))
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- (infrastructure to share the ontologies)
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x (web portal)
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x (web application OnEX)
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x (desktop GUI)
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3) API/web service
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x (web service: Ontology QueryService
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-
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x (web service to access and query available on tologies)
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x (query ontology and mapping versions, statistics, diff, match via API)
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unknown
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