Table 3 Ontologies chosen for Annotation Workflow configuration as well as overall term frequency counts per ontology.
From: Annotation Analysis for Testing Drug Safety Signals using Unstructured Clinical Notes
Ontology Name | Source | Abbreviation | Frequency |
|---|---|---|---|
Current Procedural Terminology | UMLS | CPT | 17243153 |
Human Disease Ontology | OBO | DO | 122035173 |
International Classification of Disease (ICD-10) | UMLS | ICD10 | 55572189 |
International Classification of Disease (ICD-9) | UMLS | ICD9 | 58334369 |
Logical Observation Identifier Names and Codes | UMLS | LNC | 1208284117 |
Medical Dictionary for Regulatory Activities | UMLS | MDR | 361398956 |
Medical Subject Headings | UMLS | MSH | 643026014 |
National Drug File | UMLS | NDFRT | 232557746 |
NCI Thesaurus | UMLS | NCI | 2498591490 |
Online Mendelian Inheritance in Man | UMLS | OMIM | 262747872 |
Systematized Nomenclature of Medicine–Clinical Terms | UMLS | SNOMEDCT | 2369959351 |