Skip to main content

Table 2 Evaluation of performance of residue and mutation extraction on the Nagel corpus (Modified per our annotation guidelines)

From: Literature mining of protein-residue associations with graph rules learned through distant supervision

Evaluation Scheme

Precision (%)

Recall (%)

F-Measure (%)

System1: -SLAA, +SLM

91.64

98.50

94.95

System 2: +SLAA,-SLM

74.38

79.17

76.70

System 3: -SLAA,-SLM

96.23

77.27

85.71

System 4: +SLAA,+SLM

77.41

98.88

86.84

  1. SLAA - Single letter Amino acid patterns; SLM - Single Letter Mutation patterns; + for inclusion of patterns; - for exclusion of patterns
Back to article page

Journal of Biomedical Semantics

ISSN: 2041-1480