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Table 2 Differences between IDO and IDOMAL and steps (to be) taken to unify the ontologies

From: IDOMAL: the malaria ontology revisited

 

IDO-IDOMAL “comparison”

Action

Comments

IDO:

symptom imported from OGMS, no children

  

IDOMAL:

native term, 39 children

Imported/merged terms from Symptom Ontology

 

IDO:

endemicity is quality of a population

  

IDOMAL:

endemicity is disposition

Changed in IDOMAL, now as in IDO

 

IDO:

habitat is site (material entity)

  

IDOMAL:

habitat is spatial region

Changed in IDOMAL, now as in IDO

 

IDO:

breeding site absent

  

IDOMAL:

Anopheles breeding site is a role

Changed to Anopheles breeding site role born by site (material entity)

 

IDO:

epidemiological types [of an infectious disease] absent

  

IDOMAL:

epidemiological types of malaria present

Discuss with IDO developers

Needed in IDOMAL

IDO:

antiparasitic material entity is material entity bearing antiparasitic disposition

  

IDOMAL:

antiparasitic drug is a role.

Issue solved in IDOMAL: antimalarial drug is a role born by a material entity which has antiparasitic disposition

Similar for antibiotic role/ disposition, etc.

IDO:

resistance is a disposition

  

IDOMAL:

resistance is quality (of (vector population)

Changed in IDOMAL, now as in IDO

 

IDO:

infection is a material entity

  

IDOMAL:

infection is not present; infectious disposition is not present

No action needed

Terms are not needed in IDOMAL

IDO:

vector competence is not present

  

IDOMAL:

vector competence is present

Discuss with IDO developers

Needed in IDOMAL

IDO:

infectious disease control is absent

  

IDOMAL:

malaria control is present

Discuss with IDO developers

Needed in IDOMAL

IDO:

No terms for decision support systems, [disease] and vector control, intervention methods

  

IDOMAL:

Corresponding terms present

Discuss with IDO developers

Needed in IDOMAL

IDO:

refractoriness is obsolete term

  

IDOMAL:

refractoriness is present

Discuss with IDO developers

Needed in IDOMAL

IDO:

treatment is obsolete term in IDO

  

IDOMAL:

treatment is present

Discuss with IDO developers

Needed in IDOMAL

IDO:

holoendemicity / hypoendemicity / mesoendemicity are missing

  

IDOMAL:

terms are present

Discuss with IDO developers

Needed in IDOMAL

IDO:

quality of infectious disease is absent

  

IDOMAL:

quality of malaria is present

Discuss with IDO developers

Needed in IDOMAL, acts as a placeholder for terms relating to malaria-specific interventions.

IDO:

process of infectious disease is absent

  

IDOMAL:

process of malaria is present

Discuss with IDO developers

 

IDO:

no differentiation between host/patient and pathogen

  

IDOMAL:

differentiates between host/patient, vector and pathogen

Discuss with IDO developers

Needed in IDOMAL, coverage of physiological and pathophysiological processes occurring in host and/or vector and/or parasite.