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Figure 1 | Journal of Biomedical Semantics

Figure 1

From: OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows

Figure 1

Toy ontology for OWL rendering convention. Toy ontology to illustrate the convention for representing abstract OWL structures in Figures depicting use cases. Above, the ontology is rendered using MOS; below, the ontology is rendered with the same convention as in Figures 2, 5, 6, 10 and 14. In those Figures, however, names of OWL entities are not included in the ontologies, since OPPL scripts act on absract structures (any axiomatic pattern that matches the query). Solid circle: named class; dotted circle: anonymous class; dot: named individual; solid arrow: subClassOf axiom; dotted arrow: triple (relation between individuals); line ending in circle: restriction (the small circle points to the filler class; there is no distinction between necessary and necessary/sufficient conditions)a.

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