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Table 1 RDFized glycan databases in this study

From: Introducing glycomics data into the Semantic Web

DB name URL Number of entries as of May 2013 Number of triples Reference
UniCarbKB http://www.unicarbkb.org/ Over 3300 glycan structures, approximately 9000 structure and protein associations, with over 900 publications 1977 triples for structure and protein data of one experiment [12]
BCSDB http://csdb.glycoscience.ru/bacterial/ Over 10,000 structures, over 4000 publications, over 5000 taxons, and over 2500 NMR spectra 2,595,411 triples from all data [7]
GlycomeDB http://www.glycome-db.org/ 37,140 glycan structure entries 518,733 triples from all data [8]
MonosaccharideDB http://www.monosaccharidedb.org/ About 700 monosaccharide entries 1911 triples of Basetypes, 14,692 triples of Monosaccharides, and 275 triples of Substituents [10]
GlycoEpitope http://www.glyco.is.ritsumei.ac.jp/epitope2/ 174 glycoepitopes recognized by 613 antibodies and a wide range of biochemical information related to the glycoepitopes and antibodies 220,545 triples from all data [17]
GlycoProtDB http://jcggdb.jp/rcmg/glycodb/LectinSearch 1,830 entries of mice glycoproteins and 701 of C. elegans glycoproteins 2,337,104 triples [18]
LfDB (Lectin frontier DataBase) http://jcggdb.jp/rcmg/glycodb/LectinSearch 479 entries of lectin data, including PDB information, and their glycan interaction data 902 triples of lectin-PDB relationship data [19]