Table 1 Summary of ontology terms in CLO and major source ontologies used in CLO as of November 21 st , 2013
Ontology | Classes | Object properties | Annotation properties | Total |
|---|---|---|---|---|
CLO (Cell Line Ontology) specific | 38453 | 2 | 0 | 38455 |
Imported upper-level ontologies | ||||
BFO (Basic Formal Ontology) | 22 | 38 | 0 | 60 |
RO (Relation Ontology) | 0 | 85 | 1 | 86 |
BSPO (Spatial Ontology) | 0 | 18 | 0 | 18 |
SIO (SemanticScience Integrated Ontology) | 0 | 3 | 0 | 3 |
IAO (Information Artifact Ontology) | 17 | 2 | 17 | 36 |
Imported entities from other external ontologies | ||||
OBI (Ontology for Biomedical Investigation) | 20 | 6 | 2 | 28 |
EFO (Experimental Factor Ontology) | 149 | 1 | 1 | 151 |
CL (Cell Ontology) | 269 | 0 | 0 | 269 |
UBERON | 1315 | 0 | 0 | 1315 |
NCBITaxon (NCBI Taxonomy) | 354 | 0 | 0 | 354 |
PATO (Phenotypic Quality Ontology) | 22 | 0 | 0 | 22 |
GO (Gene Ontology) | 299 | 0 | 0 | 299 |
PR (Protein Ontology) | 5 | 0 | 0 | 5 |
DOID (Human Disease Ontology) | 741 | 0 | 0 | 741 |
ChEBI (Chemical Entities of Biological Interest) | 32 | 0 | 0 | 32 |
Total | 41698 | 155 | 21 | 41874 |