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Figure 4 | Journal of Biomedical Semantics

Figure 4

From: The pathway ontology – updates and applications

Figure 4

The anatomy of an interactive pathway diagram page. A. The top of the page shows the beginning of the description with the option of viewing the whole text and the diagram below it. B. The genes in the pathway are shown by species in a tabular form with various link options. C. Genes in the pathway that have disease annotations are shown in a table that can be toggled between diseases, alphabetically listed, with the associated genes shown to the right (default), and genes, alphabetically listed, with the associated diseases shown to the right. D. Genes in the pathway that have annotations to other pathways are shown in a table that can be toggled between pathways, alphabetically listed, with the associated genes shown to the right (default), and genes, alphabetically listed, with the associated pathways shown to the right. The last section of the diagram page has the reference list as well as a view of the ontology tree (not shown).

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