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Table 1 Ontologies used in Stem Cell Commons.

From: Semantic Web repositories for genomics data using the eXframe platform

Content Type Attribute Ontology
Biomaterial Organism NCBITaxon [34]
Biomaterial Development Stage EFO [10]
Biomaterial Tissue Type FMA [12], EFO [10], BTO [37]
Biomaterial Cell Type CL [11], EFO [10]
Biomaterial Disease State NCI Thesaurus [36]
Biomaterial Treatment CHEBI [35], NCI Thesaurus [36]
  1. Following ontologies were used to annotate the samples (biomaterial content type).