Table 2 Similarity between thematic and arbitrary model sets, calculated based on the similarity of their characteristic features
From: Annotation-based feature extraction from sets of SBML models
Model sets | Ontology | Method/number of features | |||
|---|---|---|---|---|---|
| Â | Â | M2 F5 | M4 F5 | M2 F15 | M4 F15 |
BMDB & CC | ChEBI | 0.82 | 0.57 | 0.75 | 0.20 |
| Â | GO | 0.80 | 0.40 | 0.71 | 0.30 |
| Â | SBO | 0.75 | 0.44 | 0.50 | 0.43 |
BMDB & RS1 | ChEBI | 1.00 | 0.94 | 0.91 | 0.71 |
| Â | GO | 0.87 | 0.84 | 0.67 | 0.59 |
| Â | SBO | 0.75 | 0.65 | 0.63 | 0.65 |
CC & RS1 | ChEBI | 0.82 | 0.63 | 0.77 | 0.29 |
| Â | GO | 0.67 | 0.25 | 0.90 | 0.36 |
| Â | SBO | 0.50 | 0.63 | 0.70 | 0.63 |