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Table 1 A subset of imported terms and relations

From: OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data

Imported term or relation Source ontology   Original ID
RO:part of Relation Ontology   BFO_0000050
RO:participates in Relation Ontology   RO_0000056
RO:has participant Relation Ontology   RO_0000057
BFO:entity Basic Formal Ontology   BFO_0000001
BFO:continuant Basic Formal Ontology   BFO_0000002
BFO:independent continuant Basic Formal Ontology   BFO_0000004
BFO:occurrent Basic Formal Ontology   BFO_0000003
BFO:material entity Basic Formal Ontology   BFO_0000040
CHEBI:molecular entity Chemical Entities of Biological Interest Ontology   CHEBI_23367
CHEBI:ribonucleic acid Chemical Entities of Biological Interest Ontology   CHEBI_23367
CHEBI:ribosomal RNA Chemical Entities of Biological Interest Ontology   CHEBI_18111
CHEBI:small nuclear RNA Chemical Entities of Biological Interest Ontology   CHEBI_74035
CHEBI:transfer RNA Chemical Entities of Biological Interest Ontology   CHEBI_17843
NCRO:human_miRNA Non-coding RNA Ontology   NCRO_0000810
NCRO:hsa-miR-125b-1-3p Non-coding RNA Ontology   NCRO_0003283
NCRO:hsa-miR-125b-2-3p Non-coding RNA Ontology   NCRO_0003284
NCRO:hsa-miR-125b-5p Non-coding RNA Ontology   NCRO_0003282
NCRO:miRNA_target_gene Non-coding RNA Ontology   NCRO_0000025
NCRO:miRNA_and_target_gene_binding Non-coding RNA Ontology   NCRO_0000003
NCRO:protein_miRNA_promoter_binding Non-coding RNA Ontology   NCRO_0000011
IAO:information content entity Information Artifact Ontology   IAO_0000030
IAO:measurement datum Information Artifact Ontology   IAO_0000109