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Table 3 Definition of the pattern for protein with minor modification for resources without CDS content

From: Generation of open biomedical datasets through ontology-driven transformation and integration processes

?protein: INDIVIDUAL

?cds: INDIVIDUAL = create(?protein.RENDERING+_CDS)

?transcript: INDIVIDUAL

BEGIN

ADD ?protein instanceOf Polypeptide,

ADD ?protein derives_from ?cds,

ADD ?cds instanceOf CDS,

ADD ?cds part_of ?transcript,

ADD ?transcript instanceOf Transcript

END;