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Table 4 Difference between maximum and minimum values reported for each tested metric (Agreement, simUI, simGIC, mUI, mGIC, GS2) against each PL family and iterations of derived respective sets created by insertion of increasing amounts of random proteins (from CAZy) into the original families

From: Functional coherence metrics in protein families

Metrics

PL1

PL2

PL3

PL4

PL5

Agreement

0.122

0.391

0.260

0.368

0.874

simUI

0.298

0.497

0.620

0.376

0.650

simGIC

0.356

0.539

0.825

0.458

0.853

mUI

0.139

0.214

0.671

0.353

0.801

mGIC

0.147

0.216

0.672

0.343

0.802

GS2

0.137

0.224

0.238

0.177

0.246

Metrics

PL6

PL7

PL8

PL9

PL10

Agreement

0.405

0.201

0.180

0.058

0.178

simUI

0.386

0.432

0.548

0.207

0.368

simGIC

0.429

0.542

0.660

0.27 0

0.484

mUI

0.469

0.501

0.329

0.368

0.564

mGIC

0.474

0.505

0.285

0.372

0.559

GS2

0.175

0.129

0.224

0.080

0.146

Metrics

PL11

PL12

PL16

PL17

PL22

Agreement

0.229

0.771

0.831

0.869

0.400

simUI

0.108

0.644

0.613

0.649

0.443

simGIC

0.122

0.838

0.829

0.853

0.521

mUI

0.378

0.744

0.903

0.831

0.494

mGIC

0.373

0.741

0.905

0.831

0.501

GS2

0.054

0.247

0.211

0.248

0.191