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Table 1 The most central nodes in the network. The top 10 nodes based on Degree (D), Eigenvector (E), Closeness (C), and Betweenness (B) centrality metrics. The minimum (i.e., top) rank of each node based on any of the four centrality metrics is shown in the Min column

From: Ontology-based literature mining of E. coli vaccine-associated gene interaction networks

Type Name D E C B Min
Vaccine gene fimH 1 1 2 1 1
Vaccine gene fepA 2 2 1 2 1
E. coli fimA 3 7 9 6 3
E. coli ompT 4 4 3 4 3
E. coli hlyA 5 3 4 - 3
INO Inclusion 6 5 3 7 3
Vaccine gene vat - - - 3 3
Vaccine gene carA - - - 5 5
INO protein translation - - 5 - 5
E. coli yfcU 8 6 - - 6
INO gene expression 9 - 6 10 6
E. coli entF 7 - - - 7
E. coli chuA 9 8 7 - 7
E. coli tonB - - - 8 8
INO dominant regulation - - 8 - 8
INO association 9 9 9 - 9
INO regulation 9 - 9 - 9
Vaccine gene carB - - - 9 9
E. coli hlyD - 10 - - 10
  1. The rankings of the terms are shown. Terms with the same centrality scores have the same ranking. Abbreviations here: “E. coli” - E. coli gene, “Vaccine gene” - E. coli vaccine gene; “INO” – INO term