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Table 4 Comparison of F-measures obtained with various combination of substructure and neighborhood settings. F-measures are averaged over two other parameters: the depth of the neighborhood (d=4,6,8,10,12,15) and the length of the substructures (l=4,6,8,10,12,15)

From: Learning from biomedical linked data to suggest valid pharmacogenes

Substructures \ Neighborhood Graph Tree
Bag of Labels 0.763 0.781
Walks 0.777 0.797
Sub-trees 0.782 0.803