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Table 10 Manual assessment of unique mappings and estimated positive and negative contribution in the DOID-ORDO task

From: Matching disease and phenotype ontologies in the ontology alignment evaluation initiative

System-mappings Unique mappings Precision Positive contrib. Negative contrib.
BioPortal (baseline) 5 0.40   
AML 308 0.87 30.40% 4.68%
DiSMatch 259 0.40 11.80% 17.70%
FCA Map 61 0.83 5.79% 1.16%
LogMap 80 0.90 8.20% 0.91%
LogMapBio 144 0.97 15.85% 0.55%
LogMapLt 7 0.50 0.40% 0.40%
PhenoMF 3 1.00 0.34% 0.00%
XMap 16 0.56 1.03% 0.80%
Total 878 0.75 73.81% 26.19%