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Table 3 Overlap between cell-specific gene sets derived from RCV and cell expression data is low

From: Using OWL reasoning to support the generation of novel gene sets for enrichment analysis

Gene sets

Jaccard Index

B cells rcv vs Lymphocyte B FOLL ts

0.064

NK cells rcv vs Lymphocytes NK ts

0.000

T cells rcv vs Lymphocytes T various tsa

0.025a

T helper rcv vs Lymphocytes T H ts

0.032

dendritic cell rcv vs Dendritic cells ts

0.000

granulocyte rcv vs Granulocyte INFL ts

0.082

lymphocyte rcv vs Lymphocytes NK ts

0.071

macrophage rcv vs Macrophage PB ts

0.033

mast cell rcv vs Mast cell PB ts

0.045

  1. Column one lists the two gene sets compared. Column 2 lists the Jaccard similarity coefficient comparing the two gene sets (0 = no overlap, 1 = full overlap.) aIn the case of T cells the average of a range of T-cell expression datasets is shown