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Table 11 Comparing the structural validation of FCA-Map with the incoherence repairing of LogMap

From: Matching biomedical ontologies based on formal concept analysis

Matching task MA-NCI FMA-NCI FMA-SNOMED SNOMED-NCI
Input mappings 1397 2893 7684 13761
Validated anchors by FCA-Map N 1346 2824 7637 13231
  P 0.935 0.956 0.937 0.917
  R 0.830 0.917 0.803 0.665
  F 0.880 0.936 0.865 0.771
  Unsat. 14 11 272 218 1848 1836 1352 947
Repaired anchors by LogMap N 1385 2709 6415 13129
  P 0.918 0.959 0.952 0.932
  R 0.838 0.859 0.678 0.627
  F 0.876 0.907 0.792 0.750
  Unsat. 14 0 272 0 1848 0 1352 0
Validated anchors by FCA-Map and then repaired by LogMap N 1336 2662 6377 12435
  P 0.938 0.967 0.957 0.938
  R 0.827 0.851 0.678 0.619
  F 0.879 0.905 0.793 0.746
  Unsat. 14 110 272 2180 1848 18360 1352 9470