Table 9 Extension of IDO-COVID-19 from CIDO
From: The Infectious Disease Ontology in the age of COVID-19
Term | Definition |
|---|---|
COVID-19 | Coronavirus disease inhering in a SARS-CoV-2 disorder. |
COVID-19 disease course | Coronavirus disease course that is the realization of some COVID-19 disease and has participant SARS-CoV-2. |
pathogenesis (GO) | Process that generates the ability of a pathogen to induce a disorder in an organism. |
coronavirus pathogenesis (CIDO) | Virus pathogenesis that is the realization of an infectious disposition inhering in a coronavirus or coronavirus population, having at least the process parts: (1) pathogen transmission, (2) establishment of localization in host, (3) process of establishing an infection, and (4) appearance of a virus disorder. |
SARS-CoV-2 pathogenesis | Coronavirus pathogenesis process that is the realization of an infectious disposition inhering in SARS-CoV-2 or a SARS-CoV-2 population, having at least the proper process parts: (1) pathogen transmission, (2) establishment of localization in host, (3) process of establishing an infection, and (4) appearance of a virus disorder. |
replication (IDO Core) | Production process in which a participant creates a copy of itself. |
virus replication (VIDO) | Replication process in which a virus containing some portion of genetic material inherited from a parent virus is replicated. |
generative stage (IDO Core) | Temporal subdivision of a developmental process. |
virus generative stage (VIDO) | Infectious structure generative stage that is a temporal subdivision of a virus developmental process. |
virus attachment stage (VIDO) | Virus generative stage during which a virion protein binds to molecules on the host surface or host cell surface projection. |
virus penetration stage (VIDO) | Virus generative stage during which a virion or viral nucleic acid breaches the barriers of a host. |
SARS-CoV-2 attachment stage | Virus attachment stage during which SARS-CoV-2 bonds with a host cell. |
SARS-CoV-2 penetration stage | Virus penetration stage during which SARS-CoV-2 penetrates a host cell. |
SARS-CoV-2 adhesion susceptible cell | Virus adhesion susceptible cell with a functional receptor part bearing an adhesion disposition realized in a SARS-CoV-2 attachment stage. |
SARS-CoV-2 penetration disposition | Virus penetration disposition borne by a functional receptor complex that is the disposition to participate in a SARS-CoV-2 penetration process. |
negative regulation of SARS-CoV-2 attachment | Negative regulation of coronavirus replication process that stops, prevents, or reduces the frequency of some SARS-CoV-2 attachment stage. |
negative regulation of SARS-CoV-2 penetration | Negative regulation of coronavirus replication that stops, prevents, or reduces the frequency of some SARS-CoV-2 penetration stage. |