Table 1 Overview of used training data sets for the respective algorithms
From: We are not ready yet: limitations of state-of-the-art disease named entity recognizers
Training set | Algorithm | |||||
|---|---|---|---|---|---|---|
BioBERT | scispaCy | DNorm | TaggerOne | HUNER | Stanza | |
NCBI | \(\checkmark\) | \(\checkmark\) | \(\checkmark\) | \(\checkmark\) | \(\checkmark\) | |
BC5CDR | \(\checkmark\) | \(\checkmark\) | \(\checkmark\) | \(\checkmark\) | \(\checkmark\) | |
NCBI+BC5CDR | \(\checkmark\) | \(\checkmark\) | ||||
miRNA-Disease | \(\checkmark\) | |||||
BioNLP13-CG | \(\checkmark\) |