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Table 3 Further cross evaluation results of BioBERT using related corpora

From: We are not ready yet: limitations of state-of-the-art disease named entity recognizers

Train set

Test set

Precision[%]

Recall[%]

F1-Score[%]

MiRNA-disease

MiRNA-disease

78.63

80.60

79.60

BioNLP13-CG

BioNLP13-CG

86.01

86.47

86.24

NCBI

MiRNA-disease

71.96

81.53

76.45

BC5CDR

MiRNA-disease

72.74

80.59

76.47

NCBI

BioNLP-CG

50.14

79.09

61.37

BC5CDR

BioNLP-CG

48.60

75.19

59.05

NCBI

COVID Disease

46.24

29.66

36.13

BC5CDR

COVID Disease

30.64

18.28

22.89