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Table 5 Evaluation of protein residue relation extraction on Nagel corpus

From: Literature mining of protein-residue associations with graph rules learned through distant supervision

Method

Precision (%)

Recall (%)

F-Measure (%)

Abstract level co-occurence

57.10

100

72.69

Sentence level co-occurence

63.50

84.77

72.61

Subgraph matching

85.09

69.54

76.54

Subgraph matching

(Modifed annotations)

90.38

71.57

79.89