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Table 1 The 2x2 contingency table

From: Development and application of an interaction network ontology for literature mining of vaccine-associated gene-gene interactions

# of gene-gene Concept- Whole
Interaction pairs specific sub-network Network
With the INO term 30 – 1 500
Without the INO term 150 30000
  1. Note: The sub-network has 30 gene pairs associated with this INO term out of a total of 180 gene pairs. A modified Fisher’s exact test, with the “- 1” modification made to the typical Fisher’s exact test to make the statistical test more conservative, was employed to identify significantly over-represented terms (p-value of 6.9E-20).