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Table 4 The system time and saved time for end users

From: OmniSearch: a semantic search system based on the Ontology for MIcroRNA Target (OMIT) for microRNA-target gene interaction data

Query

First search

Second search

System time

User time

Percentage of saved

Percentage of saved

Percentage of saved

 

criterion

criterion

(seconds)

(seconds)

time for end users

time on DAVID analysis

time on result comparison

1

hsa-miR-1231

cell movement

2.51

10

62 %

55 %

61 %

2

hsa-miR-1288-5p

cell proliferation

2.89

9

61 %

51 %

62 %

3

hsa-miR-143-3p

mitosis

5.54

10

61 %

52 %

60 %

4

hsa-miR-192-5p

leukemic infiltration

2.24

8

53 %

53 %

59 %

5

hsa-miR-216a-5p

drug resistance,

4.09

11

65 %

55 %

62 %

  

multiple

     

6

hsa-miR-29c-3p

recurrence

8.99

11

68 %

53 %

63 %

7

hsa-miR-3155a

dna cleavage

1.21

6

53 %

47 %

55 %

8

hsa-miR-320b

drug resistance

17.59

18

73 %

51 %

66 %

9

hsa-miR-3622a-5p

entosis

0.30

6

51 %

43 %

57 %

10

hsa-miR-371b-5p

mitochondrial

3.89

12

66 %

59 %

64 %

  

dynamics

     

11

hsa-miR-3934-5p

dna methylation

0.93

8

61 %

45 %

59 %

12

hsa-miR-4263

mutagenesis

1.65

6

52 %

46 %

56 %

13

hsa-miR-4431

mitochondrial

0.17

6

53 %

47 %

55 %

  

degradation

     

14

hsa-miR-4505

cell transformation,

4.25

10

63 %

55 %

61 %

  

neoplastic

     

15

hsa-miR-4648

cell polarity

0.71

6

52 %

45 %

57 %

16

hsa-miR-4700-3p

neoplasm regression,

1.56

7

53 %

51 %

59 %

  

spontaneous

     

17

hsa-miR-4756-5p

endocytosis

3.76

10

67 %

53 %

62 %

18

hsa-miR-4802-3p

drug resistance,

1.67

7

55 %

47 %

59 %

  

microbial

     

19

hsa-miR-501-3p

insulin resistance

1.78

8

57 %

43 %

61 %

20

hsa-miR-520a-3p

ubiquitination

13.31

17

75 %

55 %

65 %

Average

—————

—————

3.95

9.30

60.05 %

50.30 %

60.15 %