Fig. 2

Ontofox retrieval of an NCBITaxon subset. Input data includes 3 species of organisms (human, mouse, and rat) and Ontofox settings. The input data and settings can be entered via web-based forms (a). The Ontofox results can be shown using Protégé (b-d). Different results may appear based on different settings: The setting “IncludeNoIntermediates” implements MIREOT (b). The setting “includeComputedIntermediates” extracts computed intermediates which that are closest ancestors of more than one low level source terms (c). The setting “includeAllIntermediates” outputs all possible intermediates