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Table 6 Comparison between the combination of LexicalMatcher and ThesaurusMatcher, and the LexicalMatcher alone

From: Tackling the challenges of matching biomedical ontologies

Task

Lexical+Thesaurus

Lexical only

 

Precision

Recall

F-measure

Precision

Recall

F-measure

Anatomy

95.7%

71.4%

81.8%

96.1%

69.7%

80.8%

FMA-NCI small

95.8%

83.7%

89.3%

96.8%

81.8%

88.7%

FMA-SNOMED small

96.9%

62.9%

76.3%

97.8%

62.2%

76.0%

SNOMED-NCI small

95.5%

59.9%

73.6%

95.9%

59.1%

73.1%

FMA-NCI whole

63.0%

82.9%

71.6%

65.4%

81.8%

72.7%

FMA-SNOMED whole

90.1%

62.8%

74.0%

92.8%

62.2%

74.5%

SNOMED-NCI whole

81.3%

59.7%

68.8%

82.0%

59.1%

68.7%