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Table 3 Example classes validated by experts

From: A neural classification method for supporting the creation of BioVerbNet

Index

Subclass name

Example members

New candidates

1.1.2

Suppress

suppress, repress

downregulate, transactivate

7.1.0

Collect

harvest, select, collect

decide, pick, cultivate, procure, gather, choose, transfuse, prioritize, obtain

13.1.0

Encompass

encompass, possess, comprise, bear, span, harbor

overlie, display, hold, exhibit, cover, infest, belong, range

14.0.0

Call

call, name, designate

qualify, regard, rename, mention, request

1.4.0

Modify

modify, catalyze

hydroxylate, hydrolyze, methylate, deaminate, esterify, oxidize, detoxify, metabolize

4.1.3

Label

stain, label, immunoblot, probe, fix

supershift, assay, immunostain, tag, immunolabel, clone, postfix, digest, clamp, counterstain, buffer, electroblot, fluoresce, radiolabel, blot

11.0.0

Release

release, detach, excise, dissociate

reinsert, retract, disassemble, deacylate, extrude, remove, depolymerize, mobilize, lose, resect, separate

10.1.3

Conduct

perform, conduct

execute, undertake