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Table 3 Sample of manually analyzed disease terms predicted as infectious disease

From: Combining lexical and context features for automatic ontology extension

Disease terms

Ontology class assigned by ANN

Manual analysis result

Suggested additional classification

DOID

Explanation

Pelizaeus-Merzbacher disease

Viral infectious disease

Non-infectious (inherited disorder)

-

-

-

Kaposi’s sarcoma

Viral infectious disease

Viral infectious disease

herpes simplex

DOID:8566

The disease is caused by Human herpesvirus 8 which is Herpesviridae infection.

maxillary sinusitis

Bacterial infectious disease

Bacterial infectious disease (usually start viral and progress to either bacterial or fungal)

-

-

It is an infection in the maxillary sinuses which could be due to different etiology, one of them is bacterial [47].

keratosis follicularis

Bacterial infectious disease

Non-infectious (genetic disease)

-

-

-

chronic rheumatic pericarditis

Viral infectious disease

The condition is triggered by autoimmune reaction to infection, mainly group A streptococci.

-

-

-

gastroparesis

Viral infectious disease

In most cases the nerve is damaged by diabetes or surgery, however, a viral infection might be a cause

-

-

A condition in which the stomach suffers from paresis that affects the food movement to the small intestine [48, 49].

osmotic diarrhea

Bacterial infectious disease

symptom

-

-

-

familial cold autoinflammatory syndrome

Viral infectious disease

Non-infectious (inherited disease)

-

-

-

angular cheilitis

Fungal infectious disease

Etiology is controversial, most commonly fungal or bacterial.

-

-

Ambiguous.

Binder syndrome

Viral infectious disease

Congenital disease

-

-

-

hypohidrosis

Bacterial infectious disease

Multi-causal

-

-

-

Sjogren’s syndrome

Viral infectious disease

autoimmune disease

-

-

-

median rhomboid glossitis

Fungal infectious disease

Etiology is controversial, however it is considered as a variant of orallesion associated with candida infection [50].

-

-

Ambiguous.

Goodpasture syndrome

Viral infectious disease

autoimmune disease

-

-

-

syphilitic meningitis

Bacterial infectious disease

Bacterial infectious disease

syphilis

DOID:4166

Considering the same concept of etiology, both diseases are caused by bacterial infection (Treponema pallidum).

acute diarrhea

Viral infectious disease

symptom

-

-

-

WHIM syndrome

Bacterial infectious disease

Congenital disease

-

-

-

erythrasma

Fungal infectious disease

Bacterial infection disease

-

-

-

chronic wasting disease

Parasitic infectious disease

Neurodegenerative disorder

-

-

-

scarlet fever

Bacterial infectious disease

Bacterial infectious disease

rheumatic fever

DOID:1586

The disease is caused by Group A bacteria of the genus Streptococcus, same causative agent for Rheumatic fever.

  1. The terms in bold represent the correctly validated terms (by a clinician) that classified as infectious diseases terms using our method (in Infectious disease classification experiment).