Table 5 Results of the single entity prediction with EXACT match on abstracts. The hyphens indicate that the entities do not appear in the respective datasets
| Â | Glaucoma | T2DM | ||||
|---|---|---|---|---|---|---|
Entity | Precision | Recall | F1 | Precision | Recall | F1 |
Author | 0.99 | 0.99 | 0.99 | 0.87 | 0.99 | 0.93 |
BaselineUnit | 0.68 | 0.56 | 0.61 | 0.73 | 0.79 | 0.76 |
BaselineValue | 0.91 | 0.67 | 0.77 | 0.88 | 0.75 | 0.81 |
CTDesign | 0.79 | 0.89 | 0.84 | 0.87 | 0.91 | 0.89 |
CTduration | 0.94 | 0.94 | 0.94 | 0.89 | 0.89 | 0.89 |
ChangeValue | 0.97 | 0.85 | 0.90 | 0.73 | 0.90 | 0.80 |
ConclusionComment | 0.79 | 0.79 | 0.79 | 0.00 | 0.00 | 0.00 |
ConfIntervalDiff | - | - | - | 0.00 | 0.00 | 0.00 |
Country | 0.82 | 0.95 | 0.88 | 0.91 | 0.56 | 0.69 |
DiffGroupAbsValue | 0.73 | 0.89 | 0.80 | 0.86 | 0.60 | 0.71 |
DisorderOrSyndrome | 0.97 | 0.92 | 0.94 | 0.64 | 0.47 | 0.55 |
DoseUnit | 0.56 | 0.82 | 0.67 | 0.80 | 0.80 | 0.80 |
DoseValue | 0.67 | 0.74 | 0.70 | 0.89 | 0.84 | 0.86 |
Drug | 0.29 | 0.13 | 0.18 | 0.85 | 0.79 | 0.81 |
EndoPointDescription | 0.17 | 0.11 | 0.13 | 0.68 | 0.77 | 0.72 |
Frequency | 0.89 | 0.69 | 0.77 | 0.76 | 0.62 | 0.68 |
Journal | 0.52 | 0.52 | 0.52 | 1.00 | 1.00 | 1.00 |
NumberAffected | 0.71 | 1.00 | 0.83 | 1.00 | 0.87 | 0.93 |
NumberPatientsArm | 0.81 | 0.81 | 0.81 | 1.00 | 0.87 | 0.93 |
NumberPatientsCT | 0.93 | 0.93 | 0.93 | 0.93 | 1.00 | 0.97 |
ObjectiveDescription | 0.58 | 0.48 | 0.52 | 0.38 | 0.28 | 0.32 |
ObservedResult | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
PMID | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
PValueChangeValue | 0.55 | 0.75 | 0.63 | 0.64 | 0.64 | 0.64 |
PercentageAffected | 0.86 | 1.00 | 0.93 | 0.98 | 0.94 | 0.96 |
Precondition | 0.71 | 0.22 | 0.33 | 0.40 | 0.16 | 0.23 |
PublicationYear | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
PvalueDiff | 0.46 | 0.61 | 0.52 | 0.85 | 0.92 | 0.88 |
RelativeChangeValue | 1.00 | 0.67 | 0.80 | - | - | - |
RelativeFreqTime | 0.44 | 0.67 | 0.53 | - | - | - |
ResultMeasuredValue | 0.84 | 0.93 | 0.88 | 0.83 | 1.00 | 0.90 |
SdDevBL | 1.00 | 0.80 | 0.89 | 0.71 | 0.45 | 0.56 |
SdDevChangeValue | 1.00 | 0.67 | 0.80 | 0.55 | 0.86 | 0.67 |
SdDevResValue | 0.83 | 1.00 | 0.91 | 0.37 | 0.86 | 0.52 |
SdErrorChangeValue | 1.00 | 1.00 | 1.00 | - | - | - |
TimePoint | 0.70 | 0.67 | 0.68 | 0.74 | 0.67 | 0.70 |
Title | 0.93 | 0.82 | 0.87 | 0.91 | 0.77 | 0.83 |
Micro average: | 0.80 | 0.73 | 0.76 | 0.81 | 0.73 | 0.77 |