Table 7 Results of the entity prediction on full text articles with PARTIAL match. The hyphens indicate that the entities do not appear in the respective datasets
| Â | Glaucoma | T2DM | ||||
|---|---|---|---|---|---|---|
Entity | Precision | Recall | F1 | Precision | Recall | F1 |
Author | 0.78 | 0.12 | 0.20 | 0.64 | 0.18 | 0.29 |
BaselineUnit | 0.31 | 0.90 | 0.46 | 0.24 | 0.79 | 0.37 |
BaselineValue | 0.10 | 0.25 | 0.14 | 0.31 | 0.60 | 0.41 |
CTDesign | 0.42 | 0.77 | 0.55 | 0.40 | 0.97 | 0.56 |
CTduration | 0.17 | 0.80 | 0.29 | 0.37 | 0.92 | 0.53 |
ChangeValue | 0.08 | 0.80 | 0.15 | 0.31 | 0.75 | 0.44 |
ConclusionComment | 0.52 | 0.92 | 0.67 | 0.00 | 0.00 | 0.00 |
ConfIntervalDiff | - | - | - | 0.00 | 0.00 | 0.00 |
Country | 0.10 | 0.33 | 0.15 | 0.00 | 0.00 | 0.00 |
DiffGroupAbsValue | 0.27 | 0.80 | 0.40 | 0.37 | 0.82 | 0.51 |
DisorderOrSyndrome | 0.34 | 0.92 | 0.50 | 0.67 | 0.83 | 0.74 |
DoseUnit | 0.14 | 1.00 | 0.25 | 0.46 | 1.00 | 0.63 |
DoseValue | 0.15 | 1.00 | 0.27 | 0.44 | 0.92 | 0.60 |
Drug | 0.33 | 0.56 | 0.42 | 0.51 | 0.96 | 0.67 |
EndoPointDescription | 0.10 | 0.50 | 0.16 | 0.24 | 0.93 | 0.38 |
Frequency | 0.25 | 0.67 | 0.36 | 0.29 | 0.73 | 0.42 |
Journal | 1.00 | 0.29 | 0.44 | 0.86 | 0.46 | 0.60 |
NumberAffected | 0.00 | 0.00 | 0.00 | 0.02 | 0.50 | 0.04 |
NumberPatientsArm | 0.00 | 0.00 | 0.00 | 0.30 | 0.65 | 0.41 |
NumberPatientsCT | 0.23 | 0.75 | 0.35 | 0.20 | 0.50 | 0.29 |
ObjectiveDescription | 1.00 | 0.20 | 0.33 | 1.00 | 0.08 | 0.15 |
ObservedResult | 0.00 | 0.00 | 0.00 | 0.50 | 0.33 | 0.40 |
PMID | 1.00 | 0.29 | 0.44 | 1.00 | 0.31 | 0.47 |
PValueChangeValue | 0.22 | 1.00 | 0.36 | 0.00 | 0.00 | 0.00 |
PercentageAffected | 0.00 | 0.00 | 0.00 | 0.14 | 0.90 | 0.25 |
Precondition | 1.00 | 0.17 | 0.29 | 0.56 | 0.33 | 0.42 |
PublicationYear | 0.60 | 0.43 | 0.50 | 0.75 | 0.69 | 0.72 |
PvalueDiff | 0.37 | 0.67 | 0.48 | 0.23 | 0.97 | 0.38 |
RelativeChangeValue | 0.04 | 1.00 | 0.07 | - | - | - |
RelativeFreqTime | 0.13 | 1.00 | 0.24 | - | - | - |
ResultMeasuredValue | 0.59 | 0.62 | 0.61 | 0.08 | 0.93 | 0.14 |
SdDevBL | 0.11 | 0.25 | 0.15 | 0.56 | 0.45 | 0.50 |
SdDevChangeValue | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
SdDevResValue | 0.46 | 0.75 | 0.57 | 0.04 | 0.71 | 0.08 |
SdErrorChangeValue | 0.00 | 0.00 | 0.00 | - | - | - |
TimePoint | 0.17 | 0.75 | 0.28 | 0.05 | 0.83 | 0.10 |
Title | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
Micro average: | 0.22 | 0.50 | 0.30 | 0.22 | 0.63 | 0.33 |