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Table 1 Statistics for each ontology and knowledge graph regarding classes, annotations, logical definitions and mappings

From: Multi-domain knowledge graph embeddings for gene-disease association prediction

 

HP

HP(-F)

HP(-PA)

HP(-MI)

HP(-CC)

HP(-CM)

HP(Only PA)

Classes

15340

      

Gene Annotations

136068

1360067

5988

131960

136050

135696

130080

Disease Annotations

40583

40583

2593

38642

40572

40471

37990

 

GO

GO(-BP)

GO(-CC)

GO(-MF)

GO(OnlyBP)

  

Classes

44117

      

Gene Annotations

76161

33482

57938

60846

42651

  
 

HPf

HPs+GO+LD

HPs+GO+Map

HPs+GO+LD+Map

   

LDs or Mappings

3203

350

494

844

   
  1. HP version date October 2020; GO version date December 2020. HP branches: Frequency (F); Clinical Course (CC); Clinical Modifier (CM); Mode of Inheritance (MI); Phenotypic Abnormality (PA). GO branches: Biological Process (BP); Cellular Component (CC); Molecular Function (MF)