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Table 1 List of labels in the GoldHamster corpus. The annotators could assign one or more label to an abstract, or even no label at all. *excluding cephalopods **including cephalopodes

From: Automatic classification of experimental models in biomedical literature to support searching for alternative methods to animal experiments

Label

Description

Examples

human

humans/material

“patients received a bolus injection of”

invertebrate

invertebrates/material*

“drosophila (se) were exposed to”

in vivo

living vertebrates**

“blood pressure telemetry in rat”

organs

vertebrate organs/tissues

“mouse isolated perfused kidney”

primary cells

vertebrate primary/stem cells

“Murine neural stem cells were isolated”

immortal cell lines

vertebrate immortal cell lines

“Hela, CHO, MDCK”

in silico

computer simulations

“digital simulation of food digestion”

others

any other kind of experiments

“retrospective studies, meta-analysis”