Table 4 Basic characteristics of the sixteen RDF resources in the domain of rare diseases, including count of URIs, literals, and triples. Also the time to perform quality assessment on the resource is included (hour:minute:second)
From: Assessing resolvability, parsability, and consistency of RDF resources: a use case in rare diseases
Resource | # URI | # Literal | # Triple | Time cost |
|---|---|---|---|---|
Orphanet catalog schema | 46 | 11 | 39 | 00:01:25 |
rare-disease biobanks and registries | 1,068 | 10 | 2,085 | 00:27:23 |
Head and neck tumor registry Austria | 54 | 10 | 47 | 00:02:04 |
A biobank of patients with Primary Immune Deficiencies | 46 | 10 | 38 | 00:02:01 |
Resource Metadata Ontology | 257 | 721 | 1627 | 00:10:09 |
The WikiPathways Ontology | 124 | 17 | 149 | 00:10:32 |
hPSCreg vocabulary | 943 | 0 | 1,000 | 00:25:02 |
NeXtProt schema | 895 | 1,410 | 3,291 | 00:04:07 |
NeXtProt vocabulary | 269,987 | 264,549 | 1,188,696 | 14:50:25 |
UniProt ontology | 396 | 4 | 391 | 00:07:35 |
ORDO | 15,070 | 1043,03 | 1,142,401 | 02:42:05 |
ATC | 6,712 | 18,993 | 66,682 | 02:13:22 |
GO | 722 | 1,901 | 4,883 | 00:31:10 |
HPO | 39,161 | 230,778 | 1,084,804 | 15:46:23 |
SNOMED CT | 356,548 | 944,485 | 6,541,868 | 277:08:30 |
NCIT | 174,590 | 1,224,526 | 8,775,164 | 98:23:20 |